Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015859523.1_cds_XP_016514344.1_26806
CDS Infomation

[gene=LOC107831129] [db_xref=GeneID:107831129] [protein=sorting and assembly machinery component 50 homolog B-like] [protein_id=XP_016514344.1] [location=complement(join(10857..10940,12488..13003,13383..13868,16912..17412))] [gbkey=CDS]
Sequence

ATGGCTTCCTCACCCGAAGAAAATCGCCGACGGCCGATCGACGACGACGACGACGAGACC
GAACCCGACGAAGACGTCGATTACGAAGAAATCGAGGAAGAAGACGAAGATGAAGAAGAA
GAAGAACAGCCAAAGCCAGTTACCGAAGAATCTCGAATGCGTTCCGATAGGGTTAAAATG
GAGAGTTTATTCCGGCGGCTATCTTCAGAGCGAGTGCCTTTACGAGTCCACGATGTGATT
ATTAAAGGCAATACTAAGACTAAGGAATCACTCATCGAAGTTGAGGTAGAAGCCCTAAAA
AATGCCACTACTGTTCAGGAGTTGCTTAAGGCGGCTAGTATTGCTAATGCGAGACTTCAA
CAGCTTGATATCTTCGATTCCGTTAATATTACTCTTGATTCCGGCCCACCGGAGCTGCCT
GGGACTACTAATGTGGTTGTTGAGGTTGTGGAAAGTGAAAATCCACTTACTGGAAGTGTT
GGAGTTTTTTCCAAGCCTGAGGCTAGAGCTTGGTCGCTTGAAGGTTCATTGAAGCTGAAA
AACTTGTTAGGTTATGGGGATATATGGGATGGGTCTTTGGCTTATGGCTGGGACCTCACT
TCAGAGGTTAGTGCTGGTGTGTCTCTACCCAGATTCAAAAGATTGATCACCCCTGTGACA
GCTCGATTATCTCTTCTTTCTCAAGATTGGCTGAAGTTCTCCTCTTACAAAGAACGAGCT
TTGGGACTTTCTCTTGGCCTACTGTCATCTAGAAGCCATGATTTGACATACAGTCTCTCT
TGGCGAGCCTTGACTGACCCATCACAAATGTCATCGAGAGCAGTGAGGAGACAGCTTGGA
CATAGTTTAATTTCAGCTCTAAAGTATACATTTAAAATTGATGGGAGAAACTCTCCTCTG
AGACCAACCCGAGGATTTGCCTTTCTTTCATCTTCTCAAATTGGTGGCCTCCTACCAGAT
CACCGGGGGTTACGCTTTCTCCGTCAGGAGTTGGACTTCCGCTATGCTTTACCTCTGGGA
TTTTATAATGCCGCTCTCAACATTGGAATTTCTGCTGGTGTAACTGTCCCATGGGGAAGT
GGGTTCTTAAGTCTGCCTACCTTTTTACCTGAGAAATTTTTTCTGGGTGGTAATTCTTCT
CCAGTTTGTGCACTTGGGGGGCCATCATCTTTATTGGGCTTCAAGACCAGGGGATTGGGA
CCTGCTGAACCTAGAAGGCAAGTTGTAGAGAATTCCAGTGATGAGAGCTATGATGCAGCT
TCTGCAATGGATTTTGTGGGAGGAGATCTCGCTGTTACTGCTTTTGCAGACCTTTCTTTT
GATCTACCATTGCGGGTATTGAGAGAAGCTGGGATTCATGGCCATGCTTTTGCTTGTACC
GGAAGCCTGAACAAATTAACAGAAAATGCCTATAAAGATTTGTCTTTACAGAAATTCCAA
GAATCATTCCGAGCTTCAGCTGGATTTGGTGTCATTGTACCGACCAAGCTCTTCCGAATG
GAGGTTAATTACTGCTACATACTGAAGCAGCAAGAGCATGACCGAGGGAAGACTGGTGTG
CAGTTCAGCTTCTCTTCATCTTTCTAG

Peptide Sequence

PEP ID

XP_016514344.1
PEP Infomation

PREDICTED: sorting and assembly machinery component 50 homolog B-like [Nicotiana tabacum]
Sequence

MASSPEENRRRPIDDDDDETEPDEDVDYEEIEEEDEDEEEEEQPKPVTEESRMRSDRVKM
ESLFRRLSSERVPLRVHDVIIKGNTKTKESLIEVEVEALKNATTVQELLKAASIANARLQ
QLDIFDSVNITLDSGPPELPGTTNVVVEVVESENPLTGSVGVFSKPEARAWSLEGSLKLK
NLLGYGDIWDGSLAYGWDLTSEVSAGVSLPRFKRLITPVTARLSLLSQDWLKFSSYKERA
LGLSLGLLSSRSHDLTYSLSWRALTDPSQMSSRAVRRQLGHSLISALKYTFKIDGRNSPL
RPTRGFAFLSSSQIGGLLPDHRGLRFLRQELDFRYALPLGFYNAALNIGISAGVTVPWGS
GFLSLPTFLPEKFFLGGNSSPVCALGGPSSLLGFKTRGLGPAEPRRQVVENSSDESYDAA
SAMDFVGGDLAVTAFADLSFDLPLRVLREAGIHGHAFACTGSLNKLTENAYKDLSLQKFQ
ESFRASAGFGVIVPTKLFRMEVNYCYILKQQEHDRGKTGVQFSFSSSF

Transcript Sequence

Gene sequence data has not been registered.